rs10420720 chr19:4472105 C>G
- Sequence
acctctgttcttattggtcgcctc[C/G]cttctctgtcccctgcacgtggtc
- ASB in cell types
- K562 (myelogenous leukemia) HepG2 (hepatoblastoma) adult erythroblasts
- ASB for transcription factors
- RBM25_HUMAN NFYB_HUMAN RBBP5_HUMAN NFYA_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RBM25_HUMAN | n/a | 1.14 | 6.00 | n/a | n/a | |||
| NFYB_HUMAN | 2.19 | n/a | 2.00 | n/a | No Hit | |||
| RBBP5_HUMAN | 2.48 | n/a | 2.00 | n/a | n/a | |||
| NFYA_HUMAN | 2.00 | -4.68 | 2.00 | n/a | No Hit | |||
| ZN366_HUMAN | n/a | 1.12 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Pancreas, Pituitary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid