rs10421126 chr19:4471800 T>C

Sequence
tggcttgcatatctactttaagcc[T/C]ctcctcctgagcgggagaggctgt
ASB in cell types
K562 (myelogenous leukemia) HEK293 (embryonic kidney) CD14+ monocytes
ASB for transcription factors
NFYB_HUMAN NFYA_HUMAN RBBP5_HUMAN STAT1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
NFYB_HUMAN 3.24 n/a 5.9·10-41.00 2.00 n/a No Hit
NFYA_HUMAN 3.07 -5.41 1.9·10-31.00 2.00 n/a No Hit
RBBP5_HUMAN 2.79 -5.12 4.0·10-31.00 2.00 n/a n/a
STAT1_HUMAN 2.19 -0.63 0.011.00 3.00 n/a No Hit
FOXK2_HUMAN 1.85 -4.33 0.011.00 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP height,  sporadic creutzfeldt-jakob disease
GTEx eQTL Esophagus_Mucosa,  Esophagus_Muscularis,  Nerve_Tibial,  Pancreas,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Thyroid

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