rs10445033 chr16:88774054 G>A
- Sequence
ccctggcttggaagttctgtgccc[G/A]gcgataaggtctgggatgcagctc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- HTF4_HUMAN NR4A1_HUMAN NRF1_HUMAN IKZF1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HTF4_HUMAN | n/a | 0.88 | 2.00 | n/a | No Hit | |||
| NR4A1_HUMAN | n/a | 3.38 | 2.00 | n/a | No Hit | |||
| NRF1_HUMAN | -0.88 | 0.89 | 2.38 | n/a | No Hit | |||
| IKZF1_HUMAN | n/a | 0.44 | 2.75 | n/a | n/a | |||
| NFAC3_HUMAN | -1.54 | 2.61 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GRASP hemoglobin (hb), infant head circumference, ldl cholesterol, mean corpuscular hemoglobin concentration (mchc), total cholesterol change with statins