rs10517 chr16:69709857 A>G
- Sequence
tcatgggactggaccccatcccat[A/G]gtaagtcatcagtttagcaatgat
- ASB in cell types
- K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN ARI1B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | n/a | 2.63 | 2.50 | n/a | No Hit | |||
| ARI1B_HUMAN | n/a | 2.76 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, college completion, fasting insulin, homa-ir, hypertension (early onset hypertension), late onset alzheimers disease, salmonella-induced pyroptosis, systolic blood pressure (sbp), triglycerides
GTEx eQTL Adipose_Subcutaneous, Brain_Anterior_cingulate_cortex_BA24, Cells_Cultured_fibroblasts, Muscle_Skeletal, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood