rs1056927 chr12:12917818 A>G

Sequence
tccccatgagacaagactgatgga[A/G]agggtggtggggcaacactgctta
ASB for transcription factors
MK03_HUMAN
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View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MK03_HUMAN 2.27 -2.27 0.031.00 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration (geographic atrophy),  irritible bowel syndrome,  neuroblastoma (brain cancer)
GTEx eQTL Brain_Spinal_cord_cervical_c-1,  Esophagus_Mucosa,  Lung,  Nerve_Tibial,  Skin_Not_Sun_Exposed_Suprapubic,  Thyroid

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