rs10796422 chr1:16645367 A>G
- Sequence
tcaccccaaccccagggcacctca[A/G]gtggccccaccaaaccttcctaac
- ASB in cell types
- HepG2 (hepatoblastoma) HEK293 (embryonic kidney) BEAS-2B (bronchial epithelium) HCT-116 (colon carcinoma)
- ASB for transcription factors
- GCR_HUMAN ZFX_HUMAN TFE3_HUMAN AHR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | 2.11 | -0.24 | 2.04 | n/a | No Hit | |||
| ZFX_HUMAN | 2.86 | -0.04 | 2.22 | n/a | No Hit | |||
| TFE3_HUMAN | 3.41 | -3.40 | 1.00 | 0.00 | Weak Discordant | |||
| AHR_HUMAN | 3.21 | -3.35 | 1.00 | n/a | No Hit | |||
| HM20B_HUMAN | 3.31 | -3.30 | 1.00 | n/a | n/a |
Items per page:
1 – 5 of 24
Motif analysis
