rs10798922 chr1:32981277 T>G
- Sequence
gcctctggcagccttcctccttcc[T/G]atactttctgccaactgctgaggc
- ASB in cell types
- K562 (myelogenous leukemia) GM01310 ( Transformed lymphovlasoid cell line ) upper lobe of left lung
- ASB for transcription factors
- ZBT40_HUMAN GABP1_HUMAN ATF7_HUMAN E4F1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZBT40_HUMAN | -2.56 | 2.96 | 1.00 | n/a | No Hit | |||
| GABP1_HUMAN | -1.67 | 1.67 | 1.00 | n/a | n/a | |||
| ATF7_HUMAN | -1.86 | 2.24 | 1.00 | n/a | No Hit | |||
| E4F1_HUMAN | -1.61 | 1.87 | 1.00 | 1.58 | Weak Concordant | |||
| AHR_HUMAN | -0.72 | 2.09 | 1.00 | n/a | No Hit |
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Motif analysis
