rs1080807 chr7:121038828 C>T
- Sequence
gtccctcagtgggaatttgcctga[C/T]gtttttctcatgattagactagag
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- TAL1_HUMAN PHB2_HUMAN ETV1_HUMAN BRD9_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| TAL1_HUMAN | -0.66 | 2.27 | 2.00 | 4.25 | Concordant | |||
| PHB2_HUMAN | n/a | 2.92 | 1.50 | n/a | n/a | |||
| ETV1_HUMAN | n/a | 2.88 | 1.50 | n/a | No Hit | |||
| BRD9_HUMAN | n/a | 2.71 | 1.50 | n/a | n/a | |||
| NFIC_HUMAN | n/a | 0.94 | 2.00 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Adrenal_Gland, Artery_Tibial, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Thyroid, Whole_Blood