rs10814083 chr9:34256349 C>T

Sequence
cactgtgtggctcacaactgggcc[C/T]cctgtgctctctgccactagactg
ASB in cell types
foreskin keratinocyte VCaP (prostate carcinoma) GBM39 (Human brain tumor)
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte -3.54 2.74 1.001.9·10-3 2.17
VCaP (prostate carcinoma) -1.78 2.13 1.003.3·10-3 1.00
GBM39 (Human brain tumor) 0.44 1.79 1.000.03 2.00
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Motif analysis

No data available

Genetic associations

GRASP adiponectin levels,  aortic valve calcium,  neuroblastoma (brain cancer),  years of education
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Artery_Tibial,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Cells_EBV-transformed_lymphocytes,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Left_Ventricle,  Liver,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Pituitary,  Skin_Sun_Exposed_Lower_leg,  Spleen,  Testis,  Thyroid,  Whole_Blood

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