rs10814339 chr9:36154681 A>C

Sequence
gtgtgtatttgatggttgctaagg[A/C]agttgtgtcatttaattcatctct
ASB in cell types
MDM(monocyte derived macrophages)
ASB for transcription factors
SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.63 0.11 9.3·10-31.00 1.86 -3.64 Concordant
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Motif analysis

SPI1_HUMAN Concordant
SPI1_HUMAN pic

Genetic associations

GRASP epilepsy,  hypertension (early onset hypertension),  prop taste detection threshold,  rheumatoid arthritis,  type 1 diabetes, rheumatoid arthritis, combined case analysis,  vitiligo
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Heart_Left_Ventricle,  Lung

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