rs10816905 chr9:109886765 T>G
- Sequence
ctcttttctcaacagtgtacctgt[T/G]ccgagaaatgttactgttatagaa
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) SUP-B15 (Childhood B acute lymphoblastic leukemia)
- ASB for transcription factors
- IKZF2_HUMAN GCR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF2_HUMAN | 2.28 | -0.11 | 1.00 | n/a | n/a | |||
| GCR_HUMAN | 2.28 | -1.76 | 1.00 | -3.24 | Concordant |
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Motif analysis
