rs10817596 chr9:114364346 C>T

Sequence
acatactctagggtttaccacagt[C/T]cctgtacacaaccatccttgctta
ASB in cell types
macrophages MOLM14 (Adult acute myeloid leukemia) MSC (mesenchymal stem cells) GM23248
ASB for transcription factors
CDK8_HUMAN EZH2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CDK8_HUMAN -0.47 2.23 1.003.2·10-4 1.00 n/a n/a
EZH2_HUMAN -2.22 2.19 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting blood glucose,  hdl cholesterol,  serum creatinine,  systolic blood pressure (sbp),  total cholesterol,  urinary albumin-to-creatinine ratio
GTEx eQTL Brain_Cerebellar_Hemisphere,  Brain_Cerebellum,  Brain_Cortex,  Brain_Hippocampus,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Whole_Blood

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