rs10819317 chr9:127906678 A>G
- Sequence
gatgacgaaagtaaggcctgagcc[A/G]gactagactccctcacagcagcca
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) MDM(monocyte derived macrophages) primary B-CLL cells
- ASB for transcription factors
- CTCF_HUMAN IKZF2_HUMAN SPI1_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.04 | -0.32 | 1.00 | n/a | No Hit | |||
| IKZF2_HUMAN | 1.36 | -1.09 | 1.00 | n/a | n/a | |||
| SPI1_HUMAN | 1.50 | 0.00 | 1.75 | n/a | No Hit | |||
| STAG1_HUMAN | 1.71 | -1.68 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Brain_Putamen_basal_ganglia, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Lung, Ovary, Prostate, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Thyroid, Whole_Blood