rs10819365 chr9:128127828 G>A
- Sequence
ccgcgggttggccggggtgagggc[G/A]acgctaagggaaccctcagcgctc
- ASB in cell types
- CD14+ monocytes HeLa (cervical adenocarcinoma) thymus-derived CD34- cells
- ASB for transcription factors
- STAT1_HUMAN INT11_HUMAN BC11B_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAT1_HUMAN | 3.03 | -5.54 | 2.00 | n/a | No Hit | |||
| INT11_HUMAN | 1.75 | -0.10 | 1.00 | n/a | n/a | |||
| BC11B_HUMAN | 1.96 | -4.63 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Brain_Caudate_basal_ganglia, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood