rs10820749 chr9:104926761 C>A
- Sequence
actcccggtcattccacggcacca[C/A]ctcggcccagcttccccatctgcg
- ASB in cell types
- MS-1 (Small cell lung carcinoma) stem and progenitor cells LUHMES (lund human mesencephalic cells) coronary artery
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.55 | -0.42 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.72 | 1.23 | 1.32 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Artery_Tibial, Colon_Sigmoid, Colon_Transverse, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic