rs10820852 chr9:91424691 C>A
- Sequence
ctgggaaacgaggctcgctgaggt[C/A]catctacccacccccgccacgcgg
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) upper lobe of left lung macrophages HeLa (cervical adenocarcinoma)
- ASB for transcription factors
- EP300_HUMAN CTCF_HUMAN INT11_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| EP300_HUMAN | 0.40 | 2.65 | 1.20 | n/a | n/a | |||
| CTCF_HUMAN | 0.55 | 1.15 | 1.33 | n/a | No Hit | |||
| INT11_HUMAN | 2.01 | -0.52 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Transverse, Lung, Nerve_Tibial, Ovary, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Small_Intestine_Terminal_Ileum, Testis, Thyroid, Uterus