rs10821415 chr9:94951177 C>A
- Sequence
atgtattccagccaaagaaataaa[C/A]accagagtgtaatgtctaagagat
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) liver MCF7 TamR (invasive ductal breast carcinoma Tamoxifen resistant) MDA-MB-134 (invasive lobular breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN HNF4A_HUMAN FOXA1_HUMAN PKNX1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | 1.65 | -0.04 | 1.80 | n/a | No Hit | |||
| HNF4A_HUMAN | 3.48 | -0.48 | 1.67 | n/a | No Hit | |||
| FOXA1_HUMAN | 2.43 | -0.13 | 1.93 | -0.59 | Weak Concordant | |||
| PKNX1_HUMAN | 2.94 | 1.04 | 2.00 | n/a | No Hit |
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Motif analysis
