rs10822013 chr10:62492218 C>T
- Sequence
tccaccagatggcacaagaaaatg[C/T]gttgtgaacaaacttggacaggtt
- ASB in cell types
- GM18526 (B – cells Lymphoblastoid Cell Lines) GM12878 (female B-cells lymphoblastoid cell line) GM18951 (B-cells Lymphoblastoid Cell Lines) GM12892 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- STAG1_HUMAN CTCF_HUMAN SMC1A_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| STAG1_HUMAN | 1.05 | -0.34 | 1.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.74 | 0.51 | 1.24 | n/a | No Hit | |||
| SMC1A_HUMAN | 1.66 | -0.65 | 1.00 | n/a | n/a |
Items per page:
1 – 3 of 3