rs10822066 chr10:62851432 T>C

Sequence
tctgccccttcccttcctcctttc[T/C]taagaagtcctcactaagaggttg
ASB for transcription factors
STAG1_HUMAN CTCF_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAG1_HUMAN 0.67 1.47 1.004.6·10-3 1.00 n/a n/a
CTCF_HUMAN 0.28 0.73 1.007.2·10-3 1.12 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Testis

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