rs10823378 chr10:69458810 C>T
- Sequence
tgagaagtgtccttcgctcttaac[C/T]tagactttgtacatggtctcgttc
- ASB in cell types
- breast tumor 22RV1 (prostate carcinoma)
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| breast tumor | 2.41 | n/a | 2.00 | |||
| 22RV1 (prostate carcinoma) | 2.16 | -4.62 | 2.00 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Caudate_basal_ganglia, Cells_Cultured_fibroblasts, Heart_Left_Ventricle, Nerve_Tibial, Prostate, Spleen, Whole_Blood