rs10823614 chr10:70759185 G>A
- Sequence
gggggagtgcctgggtttcctgcc[G/A]tcttccttcccaaagcaaaggacg
- ASB in cell types
- esophagus squamous epithelium GM12878 (female B-cells lymphoblastoid cell line) gastroesophageal sphincter GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN IKZF1_HUMAN TRI22_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.59 | 0.51 | 1.32 | n/a | No Hit | |||
| STAG1_HUMAN | 1.14 | 0.20 | 1.62 | n/a | n/a | |||
| IKZF1_HUMAN | 2.63 | -1.05 | 1.25 | n/a | n/a | |||
| TRI22_HUMAN | 1.77 | -0.36 | 1.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GRASP childhood acute lymphoblastic leukemia, college completion, homa-b, lp-pla2 activity, lp-pla2 mass, neuroticism, parkinsons disease, urinary albumin-to-creatinine ratio, years of education