rs10824060 chr10:74040406 G>C

Sequence
aactcacctagttctccctcccac[G/C]cttgctctctgtgtctgtgtccct
ASB in cell types
CTV-1 (Adult T acute lymphoblastic leukemia) K562 (myelogenous leukemia) monocyte-derived dendritic cells
ASB for transcription factors
SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SPI1_HUMAN 1.06 -0.12 8.5·10-31.00 1.29 -1.08 Weak Concordant
Items per page:
1 – 1 of 1

Motif analysis

SPI1_HUMAN Weak Concordant
SPI1_HUMAN pic

Genetic associations

GRASP cystatin c in serum,  diastolic blood pressure (dbp),  mitral annular calcium,  systolic blood pressure (sbp)
GTEx eQTL Artery_Aorta,  Artery_Tibial,  Brain_Cortex,  Colon_Sigmoid,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Lung,  Skin_Not_Sun_Exposed_Suprapubic

Download