rs10824119 chr10:74224248 C>G
- Sequence
aaaatacttaacgttgtagttgtt[C/G]catcagttttgaactgctgaataa
- ASB in cell types
- K562 (myelogenous leukemia) BEAS-2B (bronchial epithelium)
- ASB for transcription factors
- GCR_HUMAN ARI1B_HUMAN ATF3_HUMAN ZEB2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| GCR_HUMAN | -0.60 | 1.61 | 1.00 | n/a | No Hit | |||
| ARI1B_HUMAN | -2.59 | 2.98 | 1.00 | n/a | n/a | |||
| ATF3_HUMAN | -2.48 | 2.39 | 3.50 | 4.09 | Concordant | |||
| ZEB2_HUMAN | -1.74 | 2.25 | 1.00 | n/a | No Hit | |||
| REQU_HUMAN | -1.44 | 2.31 | 1.00 | n/a | n/a |
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Motif analysis
