rs10826321 chr10:59580445 A>G
- Sequence
atcaggagcacaatactgacccca[A/G]gtggaataaaatctaaacagtact
- ASB in cell types
- pancreas gastroesophageal sphincter thyroid gland SYO-1(Biphasic synovial sarcoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.88 | -0.09 | 1.25 | 0.20 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP 2 hour glucose, adiponectin levels, aortic valve calcium, college completion, fasting insulin, hdl cholesterol, homa-b, homa-ir, waist hip ratio