rs10826857 chr10:30727015 C>G
- Sequence
cagaagccaaggctccaactccag[C/G]gccgcctccggcttcacagtccta
- ASB in cell types
- GM12892 (female B-cells lymphoblastoid cell line) GM19239 (male B-cells lymphoblastoid cell line) pancreas bipolar neuron
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN RAD21_HUMAN IKZF2_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 2.25 | 0.04 | 1.65 | -1.00 | Weak Concordant | |||
| STAG1_HUMAN | 2.56 | 1.78 | 3.81 | n/a | n/a | |||
| RAD21_HUMAN | 1.96 | -0.40 | 1.79 | n/a | n/a | |||
| IKZF2_HUMAN | 2.43 | -2.35 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.78 | -0.62 | 1.25 | n/a | n/a |
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Motif analysis
