rs10828389 chr10:22989118 G>T

Sequence
gggcaaaaaaggtaatggaaggat[G/T]gttctgtagtttaatgaaacgtac
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney) foreskin keratinocyte
ASB for transcription factors
SMCA4_HUMAN SMRC1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN 2.52 -1.78 9.5·10-71.00 1.00 n/a n/a
SMRC1_HUMAN 2.71 0.02 1.0·10-61.00 1.00 n/a n/a
Items per page:
1 – 2 of 2

Motif analysis

No data available

Genetic associations

GRASP infant head circumference partial epilepsy
GTEx eQTL Artery_Tibial Esophagus_Mucosa Heart_Left_Ventricle

Download