ADASTRA v6.1.1
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rs10828389
chr10:22989118
G
>
T
Sequence
gggcaaaaaaggtaatggaaggat[G/T]gttctgtagtttaatgaaacgtac
ASB in cell types
TTC-1240 (Rhabdoid tumor of the kidney)
foreskin keratinocyte
ASB for transcription factors
SMCA4_HUMAN
SMRC1_HUMAN
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View in PheLiGe
0.05
FDR threshold
0
ES threshold
Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SMCA4_HUMAN
2.52
-1.78
9.5·10
-7
1.00
1.00
n/a
n/a
SMRC1_HUMAN
2.71
0.02
1.0·10
-6
1.00
1.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
infant head circumference
,
partial epilepsy
GTEx eQTL
Artery_Tibial
,
Esophagus_Mucosa
,
Heart_Left_Ventricle
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Generated by ADASTRA database
2025.04.22 v6.1.1 Mabel
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)