rs10830468 chr11:88232018 C>G

Sequence
caaggtctgtagcctcaaaagcct[C/G]tattctatacaaccatgccatact
ASB in cell types
adrenal gland LNCaP (prostate carcinoma) Peyer's patch right lobe of liver
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.48 1.30 1.002.2·10-10 1.37 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP biploar disorder (bipolar schizoaffective disorder),  microalbuminuria,  total cholesterol
GTEx eQTL Adipose_Subcutaneous,  Artery_Aorta,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Skin_Sun_Exposed_Lower_leg

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