rs10831020 chr11:93291419 A>C

Sequence
cctgcatgtatcccatgattcaat[A/C]aacttgattgtttactttttccca
ASB in cell types
iPS-derived dermal fibroblasts
ASB for transcription factors
RARA_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RARA_HUMAN -1.12 1.73 1.006.5·10-3 1.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP 2 hour glucose,  aortic valve calcium,  hdl cholesterol,  triglycerides change with statins
GTEx eQTL Artery_Aorta,  Brain_Nucleus_accumbens_basal_ganglia,  Breast_Mammary_Tissue,  Cells_EBV-transformed_lymphocytes,  Colon_Transverse,  Esophagus_Mucosa,  Liver,  Minor_Salivary_Gland,  Nerve_Tibial,  Ovary,  Pancreas,  Pituitary,  Prostate,  Skin_Not_Sun_Exposed_Suprapubic,  Testis,  Thyroid,  Uterus,  Vagina

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