rs10832704 chr11:16946165 C>T
- Sequence
ccgtctgggtgcttctgcttctag[C/T]tcctgggctcttcctgctagagac
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line) HCT-116-RAD21-mAC
- ASB for transcription factors
- IKZF1_HUMAN ELF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IKZF1_HUMAN | 1.22 | 1.56 | 1.50 | n/a | n/a | |||
| ELF1_HUMAN | -0.78 | 2.45 | 1.50 | 3.80 | Concordant | |||
| IKZF2_HUMAN | -0.38 | 1.15 | 1.00 | n/a | n/a |
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Motif analysis
