rs10835102 chr11:27025059 T>C
- Sequence
cctcagatgcaccaagctgatcct[T/C]gaccctaacatttttccattgccc
- ASB in cell types
- liver
- ASB for transcription factors
- HNF4A_HUMAN SP1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| HNF4A_HUMAN | 2.24 | -2.35 | 1.25 | -2.12 | Concordant | |||
| SP1_HUMAN | 2.47 | n/a | 1.00 | n/a | No Hit |
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Motif analysis
