rs10835182 chr11:3838626 T>A

Sequence
gggcaggactggaagaagaacaat[T/A]catgggagagggacgactgtgaca
ASB in cell types
MDM(monocyte derived macrophages) CD14+ monocytes
ASB for transcription factors
STAT1_HUMAN SPI1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
STAT1_HUMAN 2.13 -1.27 1.5·10-31.00 2.00 n/a No Hit
SPI1_HUMAN 1.55 0.64 0.011.00 1.38 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP appendicular lean mass-femoral neck buckling ratio bivariate association,  appendicular lean mass-femoral neck cortical thickness bivariate association,  appendicular lean mass-femoral neck cross-sectional area bivariate association,  appendicular lean mass-femoral neck periosteal diameter bivariate association,  appendicular lean mass-femoral neck section modulus bivariate association,  triglycerides
GTEx eQTL Artery_Tibial,  Colon_Transverse,  Esophagus_Mucosa,  Esophagus_Muscularis,  Lung,  Thyroid,  Whole_Blood

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