rs10835482 chr11:29101155 C>T
- Sequence
tggggcatattcatcaaatgatga[C/T]gtcacagaagaagtgttatatgtg
- ASB in cell types
- GM12878 (female B-cells lymphoblastoid cell line)
- ASB for transcription factors
- ATF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF2_HUMAN | 2.52 | -0.51 | 1.50 | 1.30 | Weak Discordant |
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Motif analysis
Genetic associations
GRASP hdl cholesterol, serum creatinine, treatment-refractory schizophrenia, triglycerides, years of education