rs10836235 chr11:34439157 C>T

Sequence
gtcggcaagtaaaggcccggcttc[C/T]cccggggcggcgcttggagggact
ASB in cell types
adult erythroblasts 22RV1 (prostate carcinoma) monocytes from periferal blood
ASB for transcription factors
RBBP5_HUMAN ANDR_HUMAN SRBP2_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RBBP5_HUMAN 3.03 -5.36 1.2·10-31.00 2.00 n/a n/a
ANDR_HUMAN 3.03 -5.54 4.6·10-31.00 2.00 n/a No Hit
SRBP2_HUMAN 2.16 n/a 0.041.00 3.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Artery_Tibial,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Mucosa,  Esophagus_Muscularis,  Heart_Atrial_Appendage,  Heart_Left_Ventricle,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg,  Testis,  Thyroid,  Whole_Blood

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