rs10836245 chr11:4539809 T>C
- Sequence
cataatctcatttgggggccaggg[T/C]gccctctcctggacagtgttagaa
- ASB in cell types
- glioblastoma cells GM10847 (female B-cells Lymphoblastoid Cell Lines) GM19240 (B cells Lymphoblastoid Cell Lines) GM19193 (female B-cells Lymphoblastoid Cell Lines)
- ASB for transcription factors
- CTCF_HUMAN STAG1_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.53 | 1.10 | 1.29 | 1.48 | Weak Concordant | |||
| STAG1_HUMAN | -0.01 | 0.99 | 1.24 | n/a | n/a |
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Motif analysis
