rs10836388 chr11:35392375 G>T
- Sequence
agggtctttcaggactcggacggg[G/T]agggcatccagcaaaagtagggct
- ASB in cell types
- A549 (lung carcinoma) THP-1 (acute monocytic leukemia) MM1.S (plasma cell myeloma) erythroid progenitors
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN STAT1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.10 | 0.48 | 1.47 | n/a | No Hit | |||
| SMC3_HUMAN | 1.19 | 0.59 | 1.88 | n/a | n/a | |||
| STAT1_HUMAN | 1.59 | 0.14 | 2.00 | n/a | No Hit |
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