rs10838673 chr11:5815609 A>C

Sequence
agtgagaatgtagagaaattggac[A/C]cttgtgcccttttggcaaaaatgt
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line)
ASB for transcription factors
IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF2_HUMAN -0.60 1.67 1.000.04 1.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP rheumatoid arthritis
GTEx eQTL Adipose_Subcutaneous Breast_Mammary_Tissue Lung Nerve_Tibial Pituitary Small_Intestine_Terminal_Ileum Spleen Testis

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