rs10840185 chr11:9166141 T>C
- Sequence
tcgccaggctggagtgcagtggtg[T/C]gatctcagctcgctgcaacctcca
- ASB in cell types
- K562 (myelogenous leukemia) gastroesophageal sphincter thoracic aorta
- ASB for transcription factors
- CTCF_HUMAN KAISO_HUMAN STAG1_HUMAN ZN316_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.93 | 0.79 | 1.16 | n/a | No Hit | |||
| KAISO_HUMAN | n/a | 1.39 | 2.00 | n/a | No Hit | |||
| STAG1_HUMAN | 0.39 | -0.05 | 1.00 | n/a | n/a | |||
| ZN316_HUMAN | 1.98 | -1.65 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Tibial, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Esophagus_Muscularis, Heart_Left_Ventricle, Muscle_Skeletal, Nerve_Tibial, Pancreas, Prostate, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Whole_Blood