rs10840484 chr11:10742998 A>C
- Sequence
ataagtcagtatgacctggctttg[A/C]cacatcctcagatcaacagcactg
- ASB in cell types
- MOLT-4 (Adult T acute lymphoblastic leukemia) Jurkat (T-cells) Th1-cells foreskin keratinocyte
- ASB for transcription factors
- CDK9_HUMAN KDM6A_HUMAN TBX21_HUMAN GATA3_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CDK9_HUMAN | -3.97 | 4.02 | 1.00 | n/a | n/a | |||
| KDM6A_HUMAN | n/a | 2.78 | 2.00 | n/a | n/a | |||
| TBX21_HUMAN | -1.04 | 1.15 | 1.00 | -3.57 | Discordant | |||
| GATA3_HUMAN | -0.48 | 1.53 | 1.75 | n/a | No Hit |
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Motif analysis
