rs10840652 chr12:121681969 A>G
- Sequence
aaggtgggcggatcacctgaggtc[A/G]ggagtttgagaccagcctgaccaa
- ASB in cell types
- GM17942 (lymphoblastoid cell) HEK293 (embryonic kidney)
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| GM17942 (lymphoblastoid cell) | -1.76 | 2.07 | 1.00 | |||
| HEK293 (embryonic kidney) | 0.65 | 0.17 | 2.01 |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Aorta, Brain_Cortex, Cells_Cultured_fibroblasts, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Muscle_Skeletal, Nerve_Tibial, Ovary, Small_Intestine_Terminal_Ileum, Spleen, Testis, Thyroid, Whole_Blood