rs10842704 chr12:26310049 T>G

Sequence
gcttttgatactgatttaattaat[T/G]aatcaattatattacttcattatg
ASB in cell types
LNCaP C4-2B (prostate carcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN -0.25 1.71 1.008.3·10-3 1.20 n/a No Hit
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Motif analysis

No data available

Genetic associations

EMBL-EBI heel bone mineral density
GTEx eQTL Adipose_Visceral_Omentum Artery_Tibial Cells_Cultured_fibroblasts Lung Nerve_Tibial Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg

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