rs10842799 chr12:26832162 C>T
- Sequence
ggcaaggccaaaaggaaactgctc[C/T]agcgaagaggggacggtgagctcc
- ASB in cell types
- HEK293 (embryonic kidney) breast tumor
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| HEK293 (embryonic kidney) | 0.75 | 0.17 | 2.00 | |||
| breast tumor | 2.73 | n/a | 2.00 |
Items per page:
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GTEx eQTL Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Muscularis, Muscle_Skeletal, Ovary, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood