rs10844683 chr12:33678439 C>T

Sequence
gtcatttatctctataactcagag[C/T]agagcacagcatctagcgcatata
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
TAL1_HUMAN NCOR1_HUMAN MTG16_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TAL1_HUMAN 1.47 -0.69 3.6·10-31.00 2.17 n/a No Hit
NCOR1_HUMAN 2.56 -3.30 8.1·10-31.00 2.00 n/a n/a
MTG16_HUMAN 0.90 n/a 0.041.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP fasting insulin,  homa-b,  homa-ir,  urinary albumin-to-creatinine ratio,  waist hip ratio
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Breast_Mammary_Tissue,  Cells_Cultured_fibroblasts,  Colon_Transverse,  Esophagus_Gastroesophageal_Junction,  Esophagus_Muscularis,  Nerve_Tibial,  Pancreas,  Thyroid

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