rs10847227 chr12:122582138 C>T

Sequence
tctctgtgaaaaccatctggaggc[C/T]gggtacagtggttcatgcctgtaa
ASB in cell types
HT1080 (fibrosarcoma)
ASB for transcription factors
SSRP1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
SSRP1_HUMAN 2.63 -2.25 0.031.00 1.00 n/a n/a
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GRASP acute lung injury following major trauma,  adiponectin levels,  autism,  autism with high iq,  height,  parkinsons disease,  rheumatoid arthritis
GTEx eQTL Adrenal_Gland,  Artery_Tibial,  Nerve_Tibial,  Pancreas,  Skin_Not_Sun_Exposed_Suprapubic,  Skin_Sun_Exposed_Lower_leg

Download