rs10847452 chr12:122679301 G>T
- Sequence
agagatggagagtgattagtaatg[G/T]aaatggaatgtagtgatgtttgca
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ARI1B_HUMAN KDM1A_HUMAN MEIS2_HUMAN NCOR1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ARI1B_HUMAN | 2.72 | n/a | 2.00 | n/a | n/a | |||
| KDM1A_HUMAN | 2.37 | 0.76 | 1.67 | n/a | n/a | |||
| MEIS2_HUMAN | 2.35 | n/a | 2.00 | n/a | No Hit | |||
| NCOR1_HUMAN | 2.46 | 0.49 | 1.67 | n/a | n/a | |||
| NFIC_HUMAN | 2.67 | -4.89 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, fasting blood glucose, fasting insulin, homa-ir, ldl cholesterol, lp-pla2 activity, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_EBV-transformed_lymphocytes, Esophagus_Mucosa, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid, Whole_Blood