rs10848282 chr12:131092555 C>T

Sequence
tgcgctctttcttcctgcaggtgg[C/T]cacttcctcccaggcggccacttc
ASB in cell types
GM12878 (female B-cells lymphoblastoid cell line) MDA-MB-231 (breast adenocarcinoma)
ASB for transcription factors
MEF2B_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 1.80 -3.03 5.5·10-31.00 1.33 n/a No Hit
IKZF2_HUMAN 1.13 -2.10 0.041.00 1.50 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP triglycerides
GTEx eQTL Colon_Sigmoid Esophagus_Muscularis

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