rs10849601 chr12:953264 A>G
- Sequence
gttgcagtgagccaagattgtgcc[A/G]ttgcactccagcctgagcgacaga
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ZN335_HUMAN ELF1_HUMAN ZN394_HUMAN ZBT17_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN335_HUMAN | n/a | 2.86 | 2.00 | n/a | No Hit | |||
| ELF1_HUMAN | -5.04 | 2.96 | 2.00 | n/a | No Hit | |||
| ZN394_HUMAN | -2.06 | 2.84 | 2.00 | n/a | No Hit | |||
| ZBT17_HUMAN | n/a | 2.82 | 2.00 | n/a | No Hit | |||
| ZN366_HUMAN | -1.89 | 2.84 | 2.00 | n/a | n/a |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Caudate_basal_ganglia, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Brain_Putamen_basal_ganglia, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Stomach, Thyroid, Whole_Blood