rs10849676 chr12:119602874 A>G

Sequence
aacaagattggccactaatgcatg[A/G]cagtggaagctgggttatgggaac
ASB in cell types
HEK293 (embryonic kidney)
ASB for transcription factors
ZN843_HUMAN OSR2_HUMAN GLIS1_HUMAN FEZF1_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZN843_HUMAN n/a 4.47 1.001.1·10-8 2.00 n/a n/a
OSR2_HUMAN n/a 3.00 1.004.3·10-6 2.00 n/a No Hit
GLIS1_HUMAN n/a 3.51 1.004.0·10-4 2.00 n/a No Hit
FEZF1_HUMAN n/a 2.57 1.005.7·10-4 2.00 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP diastolic blood pressure (dbp),  hdl cholesterol change with statins,  height,  parkinsons disease
GTEx eQTL Adipose_Visceral_Omentum,  Artery_Aorta,  Brain_Putamen_basal_ganglia,  Cells_Cultured_fibroblasts,  Esophagus_Mucosa,  Liver,  Lung,  Muscle_Skeletal,  Nerve_Tibial,  Thyroid,  Whole_Blood

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