rs10850766 chr12:117128201 C>T

Sequence
cacctgtcacatctgtgacacctg[C/T]cacatcacctgtcacctgtcactg
ASB in cell types
SU-DHL-2 (anaplastic large cell lymphoma)
ASB for transcription factors
CREB1_HUMAN ITF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CREB1_HUMAN -1.08 0.95 1.002.2·10-3 1.17 0.90 Weak Concordant
ITF2_HUMAN 1.66 0.18 0.010.85 2.00 -0.34 Weak Concordant
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Motif analysis

ITF2_HUMAN Weak Concordant
ITF2_HUMAN pic

Genetic associations

GTEx eQTL Muscle_Skeletal Skin_Sun_Exposed_Lower_leg

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