rs10851498 chr15:51244815 T>C

Sequence
cactgaaagcaaagagataagatg[T/C]tgcaagctgatgcaaatttataaa
ASB in cell types
THP-1 (acute monocytic leukemia) MSC (mesenchymal stem cells)
ASB for transcription factors
CEBPB_HUMAN CEBPA_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN 1.89 0.14 2.1·10-51.00 2.58 -2.51 Concordant
CEBPA_HUMAN 2.11 -0.08 2.7·10-51.00 1.00 -2.98 Concordant
SPI1_HUMAN 1.08 -0.02 0.051.00 1.87 n/a No Hit
Items per page:
1 – 3 of 3

Motif analysis

CEBPA_HUMAN Concordant
CEBPA_HUMAN pic

Genetic associations

GRASP autism with low iq bipolar disorder fasting insulin height homa-b homa-ir
GTEx eQTL Adipose_Subcutaneous Cells_Cultured_fibroblasts Colon_Sigmoid Lung Nerve_Tibial Skin_Sun_Exposed_Lower_leg Whole_Blood

Download