rs10852109 chr15:88649425 G>A

Sequence
accatgatgactcgtaccttctac[G/A]tctgtgcccagctgtggctgcctc
ASB in cell types
HAEC (human aortic endothelial cells) HUVEC-C (HUVEC, umbilical vein endothelial cells)
ASB for transcription factors
TF65_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
TF65_HUMAN 0.35 1.80 1.006.8·10-4 2.60 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP comorbid depressive syndrome and alcohol dependence,  neuroblastoma (brain cancer)
GTEx eQTL Adipose_Subcutaneous,  Adipose_Visceral_Omentum,  Cells_Cultured_fibroblasts,  Lung,  Muscle_Skeletal,  Whole_Blood

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